logging in or signing up genetics of sex determination and develo panigrahi_saurav Download Post to : URL : Related Presentations : Share Add to Flag Embed Email Send to Blogs and Networks Add to Channel Uploaded from authorPOINT lite Insert YouTube videos in PowerPont slides with aS Desktop Copy embed code: (To copy code, click on the text box) Embed: URL: Thumbnail: WordPress Embed Customize Embed The presentation is successfully added In Your Favorites. Views: 1177 Category: Education License: All Rights Reserved Like it (2) Dislike it (0) Added: February 19, 2009 This Presentation is Public Favorites: 1 Presentation Description sex determination is a complex mechanism involves many genes Comments Posting comment... By: sbhu (18 month(s) ago) i want this slide Saving..... Post Reply Close Saving..... Edit Comment Close Premium member Presentation Transcript Credit seminar : Credit seminar O On GENETICS OF SEX DETERMINATION AND DEVELOPMENT Speaker: Saurav Kumar Panigrahi Ph.D. (AGB). Evolution of sex : Evolution of sex Asexual reproduction. Sexual reproduction. Production of haploid gametes. Fusion – diploid zygote. Parts of evolution: Origin of sexual reproduction. Evolution and maintenance. Sex chromosome homology : Sex chromosome homology Evolved - autosomal pair. Homology - many X-Y shared sequences in differentiated regions of chromosomes. eg. YCR and YAR genes homologues on X. X born - mutated and inactive genes on Y . Y genes - structural and functional change. SRY and RBMY have X homologue - SOX3 and RBMX . (Delbridge et al. 1999) Slide 4: FIG.1 Slide 5: FIG. 2 Degradation of genes -Y : Degradation of genes -Y Acquisition of sex determining allele (mammals – SRY). Degradation - male specific gene package together to prevent recombination. Dosage inequality b/w sexes. Inactivation of one of X chromosome – dosage compensation or Lyons hypothesis. Cont… : Cont… Comparative genome mapping ( Mammals , marsupials , monotremes) 200 years Addition to prevent homology – X and degradation – Y Y has been saved from extinction Mortality of Y chromosome – No SRY New sex determining allele. (Just et al. 1995) SRY (humans ) and SRY (mouse) : SRY (humans ) and SRY (mouse) Short arm of Y chromosome SRY - Equated with TDF in man and mouse Complex with WT1 (Wilms tumor 1) transcription in testis development. complete organogenesis. Zinc finger Y(ZFY) - candidate for TDF sertoli cells and AMH (Page et al.1987) SRY : SRY SOX9 Mammals , birds and reptiles. Activates AMH or Mullerian inhibiting substance expression with orphan receptor (SF – 1). (Graves et al. 1998) Importance of sexual reproduction : Importance of sexual reproduction Genetic variation among siblings - Weismann(1889) , Fisher and Burt (2000) - Tangled bank hypothesis – Michael Ghiselin or Graham Bell ,1982 Creates novel genotype rapidly - Fisher and George Williams. Resistance to parasites – Red queen hypothesis. Van Valen 1973 Removal of deleterious genes Reconstruction of mutation free individuals - Muller Deterministic mutation hypothesis – kondrashov 1988. Sex determination : Sex determination Theories : Aristotle (384-322 BC) Females – Building material Males – Life giving power dynamics Theory of evolution – Darwin 1859 Neo Darwinism – August Weisman(1834-1914) Modern view (1960) Paradox of recombination. Paradox of meiosis. Paradox of variability. Mechanisms of sex determination. : Mechanisms of sex determination. Environmental Association with females. Egg size. Incubation temperature. Chromosomal Molecular basis Genic balance Y linked genes Environmental : Environmental Association with females: eg. Sea worm - Bonelia Free living – females Attached to probosis - males Egg size : eg. Sea worm - Dinophilus large - females small - males Incubation temperature : Incubation temperature eg. Turtles , alligators ,crocodiles. 1. M M&F F 230c 280c 300c 350c 2. F M&F F < 300c > 330c 3. F M F < 250c > 300c Slide 15: FIG.3 Chromosomal sex determination : Chromosomal sex determination XX – F and XO – M. (Orthopteran insects , grass hoppers) XO - F and XX – M ( Fumeans ) . XX - F and XY - M (humans, mice, fishes, amphibians, drosophila) XY –F and XX – M ( birds , reptiles). 2n – F and n – M ( honey bees, ants and termites). Genic balance : Genic balance Drosophila Bridges, 1921 Correlation of sex of individual with chromatin constitution. Balance b/w genes for maleness (autosomes) and those for femaleness (X chromosomes). Sex index = No. of X chromosomes = X No. of autosomal sets A Contd… : Contd… Index ratio ? 1 = Super female 1 = Female 0.5 – 1 = Intersex 0.5 = Male ? 0.5 = Super male Intersexes are neither male nor female and are completely sterile. Mechanism of X/ A action : Mechanism of X/ A action Sex determination with Y linked genes(Molecular basis) : Sex determination with Y linked genes(Molecular basis) ( mammals ,amphibians and humans ) . HY antigen. TDF through SRY. Dosage compensation – man, mouse and drosophila. Regulates expression of X linked genes. Slide 23: FIG. 5 Sex related disorders : Sex related disorders Hermaphrodites. Gynandromorphs. Androgen insensitivity syndrome . Intersex . Chromosomal abnormalities Mammals: - 47XXY - 45XO - 47XY –Downs, Edwards, Pataus syndrome. Drosophila –XO,XXY. Hermaphroditism or Intersexuality. : Hermaphroditism or Intersexuality. Ovarian follicles and testicular tubules in same or different gonads. True Pseudo Freemartinism Behavioural – Nymphomania and Adrenal virilism. Animals : Sequential : ( Protoandry or Protogyny ) Simultaneous or Synchronous Gonadal dysgenesis Gynandromorphs : Gynandromorphs Part female (Gyn) and part male (Andro). Regional disharmony in distribution of sex chromosomes. Male and female parts run longitudinally or transversely. Sex mosaics. Arise from XX zygotes. XO – male phenotype XX – female phenotype. Impossible in vertebrates. Androgen insensitivity syndrome : Androgen insensitivity syndrome Androgen resistance syndrome. Mutation of Tfm gene. Not responding to testosterone. Various degrees Complete - Female - 46 XY and testis Incomplete - Male features – puberty. Testicular Feminization. . Sex hormones and behaviour : Sex hormones and behaviour Androgens : Testosterone Estrogen Hypothalamus differentiation Estrogen availability – male. Absence – female Testicular feminization. Sex reversal : Sex reversal Transformation of sexual characterization. Types : Complete Incomplete. Not possible: Mature individuals Sexual dimorphism In mammals – late embryonic stage- Impossible. In birds: Gonadectomy through disease Development through sex cords. Sex selection : Sex selection 3 stages: Pre conceptional or semen sexing . Pre implantation genetic diagnosis (PGD) or Embryo sexing. Post implantation selection. Pre conceptional: Veterinary medicine. Large scale insemination programmes. Patented by XY Inc. of Fort Collins, USA Flow cytometer : Flow cytometer 2.Sperm selection by gradients : 2.Sperm selection by gradients Centrifugation through gradient layers of albumin. Y spermatozoa - bright spot containing quinacrine dihydrochloride dye. Alters X :Y spermatozoa ratio. Alternatives for albumin - Percoll , Ficoll or sephadex. 3.Immunological sexing : 3.Immunological sexing Bradley (1989), Blecher et. al (1999). HY antigen on plasma membrane (post acrosomal region and mid piece ) Treatment with HY antiserum kills Y bearing sperms 4. Based on motility : 4. Based on motility Density gradient centrifugation + sperm migration over BSA ingredients in laminar flow medium. Swim up:Differential swimming ability of X and Y X – more linear swimming ability. Advantages of sexed semen : Advantages of sexed semen 1.calving ease : -10.9 %difficulty as bull. - 5.3% difficulty as heifer. Advantages of less calving problems : Increased milk production . More live calves / pregnancy. Reduced culling of 1 lactation heifers. Reduced open days and semen costs. Lower vet bills. 2. Genetic progress. : 2. Genetic progress. In dairy cattle - 15 % increase (Van Vleck, 1981) MOET nucleus scheme - increases by 0.4-1.4% ( Montaldo et. al 1988) MOET+ sexed semen + MAS Farming system - male dairy calves. Avg. lactation length -extended to 18, 20, or 24 Months. Top 50 cows - with X bearing sperms and bottom 50 - with Y bearing beef semen. ( Hohenboken,1999 ) 3.Biosecurity: : 3.Biosecurity: Expansion of herd with own replacements. Harmful diseases Milk quality. 4. Breeders dream 5.In vitro embryo production(IVP) : 5.In vitro embryo production(IVP) More commercially applicable than in-vivo. Genetically useful cows. In vitro - <1,00,000 sperms /100 ova. ? of ova fertilized : Same for sexed and unsexed semen Blastocyst production - 70% in sexed semen Limitations of semen sexing : Limitations of semen sexing Sorting speed. In vivo conception rate: 35 – 40 % with sexed semen 50 – 60 %with unsexed semen 3. Cost Pre implantation genetic diagnosis(PIGD) : Pre implantation genetic diagnosis(PIGD) 1. Antibody. 2. DNA analysis. 3. RAPD markers - ovine embryos. 4. Loop mediated isothermal amplification (LAMP). 5. PCR - Y specific probes. 6. Follicular fluid steroid levels. 7. Sexing kit. 1.Antibody: : 1.Antibody: sex specific proteins (SSP) on outer surface of cells. Preparation of antibodies. Elimination of male or female embryo. Selection of embryos. Grown in lab – transfer to animals. 2.DNA analysis : 2.DNA analysis By using DNA of embryos. Limitations: Invasive procedure . Chances of infection. Embryo growing. Complex procedure. 3.RAPD markers in Ovines : 3.RAPD markers in Ovines Highly specific to Ovines. PCR primers - ovine specific Y chromosome ZFY/ZFX with randomly amplified polymorphic marker (Ucd043). 100 % accuracy - detects 10 pg of male DNA and 50 ng of female DNA. 4.Loop mediated isothermal amplification : 4.Loop mediated isothermal amplification DNA amplification method . DNA of single blastomeres - extracted using heat or NaOH or proteinase K . Product detected by turbidity of reaction mixture. Accuracy- 88.9 - 94.4% Pregnancy rate : 57.4 % Same principle in sexing kit. 5. Y specific probes : 5. Y specific probes Isolation and cloning of specific DNA sequences 3 sets of primers. 1’st pair - bovine specific satellite sequence amplified in both male and females. Other 2 pairs recognise bovine Y specific sequences. Highly specific for bovine embryos. Follicular fluid steroid levels : Follicular fluid steroid levels Based on level of testosterone in follicular fluid. High concentration of testosterone Y - Chromosome. Dominant females- male offspring. Uses of sex determination in embryos : Uses of sex determination in embryos Knowing karyotype. Abnormals aborted. Embryo sexing and cloning. eg. Production of bile salt stimulated lipase in females Control of gender and fertility- acquatic species - Monosex population Temperature dependent sex determination. Post implantational sex determination : Post implantational sex determination By karyotyping. HY antigens. Amniocentesis using DNA probes. Ultrasonography. Involves termination of pregnancy if it is of undesired sex. Prognosis : Prognosis Rate of adaptation –more than AI or milk recording.Young et al.(1988) 1st sexed calf -1990 and 1st sexed foal - 1988. Acquisition by dairy producers. Endangered species. Ethics and legal issues. Transgenic bull - X chromosomal sperms. Slide 51: THANK YOU You do not have the permission to view this presentation. In order to view it, please contact the author of the presentation.
genetics of sex determination and develo panigrahi_saurav Download Post to : URL : Related Presentations : Share Add to Flag Embed Email Send to Blogs and Networks Add to Channel Uploaded from authorPOINT lite Insert YouTube videos in PowerPont slides with aS Desktop Copy embed code: (To copy code, click on the text box) Embed: URL: Thumbnail: WordPress Embed Customize Embed The presentation is successfully added In Your Favorites. Views: 1177 Category: Education License: All Rights Reserved Like it (2) Dislike it (0) Added: February 19, 2009 This Presentation is Public Favorites: 1 Presentation Description sex determination is a complex mechanism involves many genes Comments Posting comment... By: sbhu (18 month(s) ago) i want this slide Saving..... Post Reply Close Saving..... Edit Comment Close Premium member Presentation Transcript Credit seminar : Credit seminar O On GENETICS OF SEX DETERMINATION AND DEVELOPMENT Speaker: Saurav Kumar Panigrahi Ph.D. (AGB). Evolution of sex : Evolution of sex Asexual reproduction. Sexual reproduction. Production of haploid gametes. Fusion – diploid zygote. Parts of evolution: Origin of sexual reproduction. Evolution and maintenance. Sex chromosome homology : Sex chromosome homology Evolved - autosomal pair. Homology - many X-Y shared sequences in differentiated regions of chromosomes. eg. YCR and YAR genes homologues on X. X born - mutated and inactive genes on Y . Y genes - structural and functional change. SRY and RBMY have X homologue - SOX3 and RBMX . (Delbridge et al. 1999) Slide 4: FIG.1 Slide 5: FIG. 2 Degradation of genes -Y : Degradation of genes -Y Acquisition of sex determining allele (mammals – SRY). Degradation - male specific gene package together to prevent recombination. Dosage inequality b/w sexes. Inactivation of one of X chromosome – dosage compensation or Lyons hypothesis. Cont… : Cont… Comparative genome mapping ( Mammals , marsupials , monotremes) 200 years Addition to prevent homology – X and degradation – Y Y has been saved from extinction Mortality of Y chromosome – No SRY New sex determining allele. (Just et al. 1995) SRY (humans ) and SRY (mouse) : SRY (humans ) and SRY (mouse) Short arm of Y chromosome SRY - Equated with TDF in man and mouse Complex with WT1 (Wilms tumor 1) transcription in testis development. complete organogenesis. Zinc finger Y(ZFY) - candidate for TDF sertoli cells and AMH (Page et al.1987) SRY : SRY SOX9 Mammals , birds and reptiles. Activates AMH or Mullerian inhibiting substance expression with orphan receptor (SF – 1). (Graves et al. 1998) Importance of sexual reproduction : Importance of sexual reproduction Genetic variation among siblings - Weismann(1889) , Fisher and Burt (2000) - Tangled bank hypothesis – Michael Ghiselin or Graham Bell ,1982 Creates novel genotype rapidly - Fisher and George Williams. Resistance to parasites – Red queen hypothesis. Van Valen 1973 Removal of deleterious genes Reconstruction of mutation free individuals - Muller Deterministic mutation hypothesis – kondrashov 1988. Sex determination : Sex determination Theories : Aristotle (384-322 BC) Females – Building material Males – Life giving power dynamics Theory of evolution – Darwin 1859 Neo Darwinism – August Weisman(1834-1914) Modern view (1960) Paradox of recombination. Paradox of meiosis. Paradox of variability. Mechanisms of sex determination. : Mechanisms of sex determination. Environmental Association with females. Egg size. Incubation temperature. Chromosomal Molecular basis Genic balance Y linked genes Environmental : Environmental Association with females: eg. Sea worm - Bonelia Free living – females Attached to probosis - males Egg size : eg. Sea worm - Dinophilus large - females small - males Incubation temperature : Incubation temperature eg. Turtles , alligators ,crocodiles. 1. M M&F F 230c 280c 300c 350c 2. F M&F F < 300c > 330c 3. F M F < 250c > 300c Slide 15: FIG.3 Chromosomal sex determination : Chromosomal sex determination XX – F and XO – M. (Orthopteran insects , grass hoppers) XO - F and XX – M ( Fumeans ) . XX - F and XY - M (humans, mice, fishes, amphibians, drosophila) XY –F and XX – M ( birds , reptiles). 2n – F and n – M ( honey bees, ants and termites). Genic balance : Genic balance Drosophila Bridges, 1921 Correlation of sex of individual with chromatin constitution. Balance b/w genes for maleness (autosomes) and those for femaleness (X chromosomes). Sex index = No. of X chromosomes = X No. of autosomal sets A Contd… : Contd… Index ratio ? 1 = Super female 1 = Female 0.5 – 1 = Intersex 0.5 = Male ? 0.5 = Super male Intersexes are neither male nor female and are completely sterile. Mechanism of X/ A action : Mechanism of X/ A action Sex determination with Y linked genes(Molecular basis) : Sex determination with Y linked genes(Molecular basis) ( mammals ,amphibians and humans ) . HY antigen. TDF through SRY. Dosage compensation – man, mouse and drosophila. Regulates expression of X linked genes. Slide 23: FIG. 5 Sex related disorders : Sex related disorders Hermaphrodites. Gynandromorphs. Androgen insensitivity syndrome . Intersex . Chromosomal abnormalities Mammals: - 47XXY - 45XO - 47XY –Downs, Edwards, Pataus syndrome. Drosophila –XO,XXY. Hermaphroditism or Intersexuality. : Hermaphroditism or Intersexuality. Ovarian follicles and testicular tubules in same or different gonads. True Pseudo Freemartinism Behavioural – Nymphomania and Adrenal virilism. Animals : Sequential : ( Protoandry or Protogyny ) Simultaneous or Synchronous Gonadal dysgenesis Gynandromorphs : Gynandromorphs Part female (Gyn) and part male (Andro). Regional disharmony in distribution of sex chromosomes. Male and female parts run longitudinally or transversely. Sex mosaics. Arise from XX zygotes. XO – male phenotype XX – female phenotype. Impossible in vertebrates. Androgen insensitivity syndrome : Androgen insensitivity syndrome Androgen resistance syndrome. Mutation of Tfm gene. Not responding to testosterone. Various degrees Complete - Female - 46 XY and testis Incomplete - Male features – puberty. Testicular Feminization. . Sex hormones and behaviour : Sex hormones and behaviour Androgens : Testosterone Estrogen Hypothalamus differentiation Estrogen availability – male. Absence – female Testicular feminization. Sex reversal : Sex reversal Transformation of sexual characterization. Types : Complete Incomplete. Not possible: Mature individuals Sexual dimorphism In mammals – late embryonic stage- Impossible. In birds: Gonadectomy through disease Development through sex cords. Sex selection : Sex selection 3 stages: Pre conceptional or semen sexing . Pre implantation genetic diagnosis (PGD) or Embryo sexing. Post implantation selection. Pre conceptional: Veterinary medicine. Large scale insemination programmes. Patented by XY Inc. of Fort Collins, USA Flow cytometer : Flow cytometer 2.Sperm selection by gradients : 2.Sperm selection by gradients Centrifugation through gradient layers of albumin. Y spermatozoa - bright spot containing quinacrine dihydrochloride dye. Alters X :Y spermatozoa ratio. Alternatives for albumin - Percoll , Ficoll or sephadex. 3.Immunological sexing : 3.Immunological sexing Bradley (1989), Blecher et. al (1999). HY antigen on plasma membrane (post acrosomal region and mid piece ) Treatment with HY antiserum kills Y bearing sperms 4. Based on motility : 4. Based on motility Density gradient centrifugation + sperm migration over BSA ingredients in laminar flow medium. Swim up:Differential swimming ability of X and Y X – more linear swimming ability. Advantages of sexed semen : Advantages of sexed semen 1.calving ease : -10.9 %difficulty as bull. - 5.3% difficulty as heifer. Advantages of less calving problems : Increased milk production . More live calves / pregnancy. Reduced culling of 1 lactation heifers. Reduced open days and semen costs. Lower vet bills. 2. Genetic progress. : 2. Genetic progress. In dairy cattle - 15 % increase (Van Vleck, 1981) MOET nucleus scheme - increases by 0.4-1.4% ( Montaldo et. al 1988) MOET+ sexed semen + MAS Farming system - male dairy calves. Avg. lactation length -extended to 18, 20, or 24 Months. Top 50 cows - with X bearing sperms and bottom 50 - with Y bearing beef semen. ( Hohenboken,1999 ) 3.Biosecurity: : 3.Biosecurity: Expansion of herd with own replacements. Harmful diseases Milk quality. 4. Breeders dream 5.In vitro embryo production(IVP) : 5.In vitro embryo production(IVP) More commercially applicable than in-vivo. Genetically useful cows. In vitro - <1,00,000 sperms /100 ova. ? of ova fertilized : Same for sexed and unsexed semen Blastocyst production - 70% in sexed semen Limitations of semen sexing : Limitations of semen sexing Sorting speed. In vivo conception rate: 35 – 40 % with sexed semen 50 – 60 %with unsexed semen 3. Cost Pre implantation genetic diagnosis(PIGD) : Pre implantation genetic diagnosis(PIGD) 1. Antibody. 2. DNA analysis. 3. RAPD markers - ovine embryos. 4. Loop mediated isothermal amplification (LAMP). 5. PCR - Y specific probes. 6. Follicular fluid steroid levels. 7. Sexing kit. 1.Antibody: : 1.Antibody: sex specific proteins (SSP) on outer surface of cells. Preparation of antibodies. Elimination of male or female embryo. Selection of embryos. Grown in lab – transfer to animals. 2.DNA analysis : 2.DNA analysis By using DNA of embryos. Limitations: Invasive procedure . Chances of infection. Embryo growing. Complex procedure. 3.RAPD markers in Ovines : 3.RAPD markers in Ovines Highly specific to Ovines. PCR primers - ovine specific Y chromosome ZFY/ZFX with randomly amplified polymorphic marker (Ucd043). 100 % accuracy - detects 10 pg of male DNA and 50 ng of female DNA. 4.Loop mediated isothermal amplification : 4.Loop mediated isothermal amplification DNA amplification method . DNA of single blastomeres - extracted using heat or NaOH or proteinase K . Product detected by turbidity of reaction mixture. Accuracy- 88.9 - 94.4% Pregnancy rate : 57.4 % Same principle in sexing kit. 5. Y specific probes : 5. Y specific probes Isolation and cloning of specific DNA sequences 3 sets of primers. 1’st pair - bovine specific satellite sequence amplified in both male and females. Other 2 pairs recognise bovine Y specific sequences. Highly specific for bovine embryos. Follicular fluid steroid levels : Follicular fluid steroid levels Based on level of testosterone in follicular fluid. High concentration of testosterone Y - Chromosome. Dominant females- male offspring. Uses of sex determination in embryos : Uses of sex determination in embryos Knowing karyotype. Abnormals aborted. Embryo sexing and cloning. eg. Production of bile salt stimulated lipase in females Control of gender and fertility- acquatic species - Monosex population Temperature dependent sex determination. Post implantational sex determination : Post implantational sex determination By karyotyping. HY antigens. Amniocentesis using DNA probes. Ultrasonography. Involves termination of pregnancy if it is of undesired sex. Prognosis : Prognosis Rate of adaptation –more than AI or milk recording.Young et al.(1988) 1st sexed calf -1990 and 1st sexed foal - 1988. Acquisition by dairy producers. Endangered species. Ethics and legal issues. Transgenic bull - X chromosomal sperms. Slide 51: THANK YOU